Transcript: ENST00000586014.1 VASP-003

Description

vasodilator-stimulated phosphoprotein [Source:HGNC Symbol;Acc:12652]

Location

Chromosome 19: 46,010,764-46,030,200 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 10001 variant alleles and maps to 368 oligo probes.

Gene

This transcript is a product of gene ENSG00000125753.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245932.6	VASP-001	2305	380aa	ENSP00000245932.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33051	K7ENR7 P50552	NM_003370.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589627.1	VASP-011	696	59aa	ENSP00000467061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592139.1	VASP-012	424	46aa	ENSP00000464742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590603.1	VASP-004	388	35aa	ENSP00000467773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586014.1	VASP-003	1725	103aa	ENSP00000467005.1	Nonsense mediated decay		K7ENL7 K7ENR7	-	-
ENST00000588482.1	VASP-005	804	183aa	ENSP00000466319.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586619.1	VASP-010	655	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588463.1	VASP-007	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590459.1	VASP-006	405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588273.1	VASP-009	318	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587444.1	VASP-008	240	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 5, Transcript length: 1,725 bps, Translation length: 103 residues

Version

ENST00000586014.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000459593 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000586014.1 VASP-003

Summary