Transcript: ENST00000593678.1 GTF2F1-006

Description

general transcription factor IIF, polypeptide 1, 74kDa [Source:HGNC Symbol;Acc:4652]

Gene Synonyms

BTF4, RAP74, TF2F1, TFIIF

Location

Chromosome 19: 6,379,889-6,391,963 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 6537 variant alleles and maps to 537 oligo probes.

Gene

This transcript is a product of gene ENSG00000125651.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394456.5	GTF2F1-001	2731	517aa	ENSP00000377969.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12165	M0R0Z3 P35269	NM_002096.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593678.1	GTF2F1-006	1705	433aa	ENSP00000469091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUG6 M0QXD6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429701.2	GTF2F1-201	1705	432aa	ENSP00000392107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595047.1	GTF2F1-005	1382	381aa	ENSP00000471403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0R9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598607.1	GTF2F1-003	568	127aa	ENSP00000471542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0Z3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594213.1	GTF2F1-008	1002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594965.1	GTF2F1-007	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,705 bps, Translation length: 433 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000593678.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398036 (version 2)

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Recent locations

Transcript: ENST00000593678.1 GTF2F1-006

Summary