Transcript: ENST00000263341.2 IL1B-001

Description

interleukin 1, beta [Source:HGNC Symbol;Acc:5992]

Gene Synonyms

IL-1, IL-1B, IL1-BETA, IL1F2

Location

Chromosome 2: 113,587,328-113,594,480 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 32 domains and features, is associated with 2938 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000125538.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263341.2	IL1B-001	1631	269aa	ENSP00000263341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2102	B5BUQ8 C9JSC2 C9JVK0 C9JWV2 P01584	NM_000576.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418817.1	IL1B-003	581	143aa	ENSP00000407219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSC2 C9JVK0 C9JWV2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432018.1	IL1B-007	581	125aa	ENSP00000409680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSC2 C9JVK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416750.1	IL1B-006	580	111aa	ENSP00000400854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491056.1	IL1B-002	1617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496280.1	IL1B-005	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487639.1	IL1B-008	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477398.1	IL1B-004	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,631 bps, Translation length: 269 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01584

CCDS

This transcript is a member of the Human CCDS set: CCDS2102

Version

ENST00000263341.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254125 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000263341.2 IL1B-001

Summary