Transcript: ENST00000562017.1 MT2A-002

Description

metallothionein 2A [Source:HGNC Symbol;Acc:7406]

Gene Synonyms

CES1, MT2

Location

About this transcript

This transcript has 1 exon, is associated with 516 variant alleles and maps to 412 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245185.5	MT2A-001	786	61aa	ENSP00000245185.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10763	P02795	NM_005953.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561491.1	MT2A-005	581	73aa	ENSP00000456804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSP9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563985.1	MT2A-006	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567300.1	MT2A-004	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562017.1	MT2A-002	903	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 903 bps,

Version

ENST00000562017.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434300 (version 1)