Transcript: ENST00000374037.3 SPDEF-001

Description

SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:17257]

Gene Synonyms

PDEF, PSE, RP11-375E1__A.3, bA375E1.3

Location

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 8302 variant alleles and maps to 471 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374037.3	SPDEF-001	1895	335aa	ENSP00000363149.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4794	O95238	NM_012391.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544425.1	SPDEF-201	1677	319aa	ENSP00000442715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59013	O95238	NM_001252294.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,895 bps, Translation length: 335 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95238

CCDS

This transcript is a member of the Human CCDS set: CCDS4794

Version

ENST00000374037.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040246 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.