Transcript: ENST00000398799.2 XPO5-010

Description

exportin 5 [Source:HGNC Symbol;Acc:17675]

Gene Synonyms

KIAA1291, RANBP21, exp5

Location

Chromosome 6: 43,538,667-43,543,722 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 2391 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000124571.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265351.7	XPO5-001	5360	1204aa	ENSP00000265351.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47430	E2QRM3 Q9HAV4	NM_020750.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455285.2	XPO5-015	758	253aa	ENSP00000387384.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000398835.3	XPO5-013	868	24aa	ENSP00000381816.3	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496341.2	XPO5-012	800	107aa	ENSP00000424196.1	Nonsense mediated decay		H0Y9I3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486936.2	XPO5-005	601	60aa	ENSP00000426185.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000398799.2	XPO5-010	568	76aa	ENSP00000381779.2	Nonsense mediated decay		E2QRM3	-	-
ENST00000424378.2	XPO5-011	624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000455854.2	XPO5-009	3629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515657.1	XPO5-014	910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488195.2	XPO5-006	868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000450462.2	XPO5-004	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513451.1	XPO5-007	232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 568 bps, Translation length: 76 residues

Version

ENST00000398799.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373663 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000398799.2 XPO5-010

Summary