Transcript: ENST00000505420.1 SLC17A3-009

Description

solute carrier family 17 (organic anion transporter), member 3 [Source:HGNC Symbol;Acc:10931]

Gene Synonyms

NPT4

Location

Chromosome 6: 25,841,533-25,849,622 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 3053 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000124564.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397060.4	SLC17A3-002	2052	498aa	ENSP00000380250.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47385	H0Y9F7 O00476	NM_001098486.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360657.3	SLC17A3-001	1750	420aa	ENSP00000353873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4566	H0Y9F7 O00476	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361703.6	SLC17A3-003	1543	420aa	ENSP00000355307.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4566	H0Y9F7 O00476	NM_006632.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505420.1	SLC17A3-009	661	51aa	ENSP00000424027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9F7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481949.2	SLC17A3-004	599	99aa	ENSP00000421855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9F7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506105.1	SLC17A3-006	1362	112aa	ENSP00000424729.1	Nonsense mediated decay		E9PBQ8	-	-
ENST00000449356.2	SLC17A3-010	563	112aa	ENSP00000415622.2	Nonsense mediated decay		E9PBQ8	-	-
ENST00000509714.1	SLC17A3-008	1549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503922.1	SLC17A3-005	1145	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000308453.5	SLC17A3-007	1138	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 661 bps, Translation length: 51 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000505420.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367945 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000505420.1 SLC17A3-009

Summary