Transcript: ENST00000395822.3 ZBP1-003

Description

Z-DNA binding protein 1 [Source:HGNC Symbol;Acc:16176]

Gene Synonyms

C20orf183, DAI, DLM-1, DLM1, dJ718J7.3

Location

Chromosome 20: 56,178,902-56,195,632 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 8385 variant alleles and maps to 448 oligo probes.

Gene

This transcript is a product of gene ENSG00000124256.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340462.4	ZBP1-201	2225	406aa	ENSP00000344954.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H171	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371173.3	ZBP1-001	2195	429aa	ENSP00000360215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13461	Q9H171	NM_030776.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395822.3	ZBP1-003	2073	354aa	ENSP00000379167.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54477	Q9H171	NM_001160418.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343535.4	ZBP1-202	1622	446aa	ENSP00000340584.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H171	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541799.1	ZBP1-008	1041	248aa	ENSP00000440552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54478	Q9H171	NM_001160419.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453793.1	ZBP1-005	357	119aa	ENSP00000404620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000538947.1	ZBP1-009	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000432548.2	ZBP1-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546110.1	ZBP1-007	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461547.1	ZBP1-004	4213	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480037.1	ZBP1-002	1737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,073 bps, Translation length: 354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H171

CCDS

This transcript is a member of the Human CCDS set: CCDS54477

Version

ENST00000395822.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000267828 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395822.3 ZBP1-003

Summary