Transcript: ENST00000465404.2 AMD1-004

Description

adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:457]

Gene Synonyms

ADOMETDC, AMD, SAMDC

Location

Chromosome 6: 111,214,028-111,215,264 forward strand.

About this transcript

This transcript has 3 exons, is associated with 586 variant alleles and maps to 390 oligo probes.

Gene

This transcript is a product of gene ENSG00000123505.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368885.3	AMD1-003	3438	334aa	ENSP00000357880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5086	P17707 Q5VXN5	NM_001634.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368882.3	AMD1-001	3121	186aa	ENSP00000357877.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34512	P17707	NM_001033059.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368876.1	AMD1-002	3040	265aa	ENSP00000357870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VXN5	NM_001287214.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368877.5	AMD1-201	1605	305aa	ENSP00000357871.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NNH3 Q5VXN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451850.2	AMD1-202	1181	214aa	ENSP00000389988.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465404.2	AMD1-004	782	5aa	ENSP00000433396.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 782 bps, Translation length: 5 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000465404.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041819 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000465404.2 AMD1-004

Summary