Transcript: ENST00000243112.5 SMUG1-008

Description

single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:HGNC Symbol;Acc:17148]

Gene Synonyms

FDG, HMUDG, UNG3

Location

Chromosome 12: 54,575,255-54,582,760 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 3699 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSG00000123415.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000505128.1	SMUG1-007	2607	126aa	ENSP00000421894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAI1 D6RAS0 D6RD88 D6RIA4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508394.2	SMUG1-001	1697	270aa	ENSP00000424191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8874	D6RA25 D6RA78 D6RAS0 D6RD88 D6RIA4 Q53HV7	NM_014311.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337581.3	SMUG1-005	1571	270aa	ENSP00000338606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8874	D6RA25 D6RA78 D6RAS0 D6RD88 D6RIA4 Q53HV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401977.2	SMUG1-020	1082	270aa	ENSP00000384828.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8874	D6RA25 D6RA78 D6RAS0 D6RD88 D6RIA4 Q53HV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513838.1	SMUG1-003	1006	177aa	ENSP00000423629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58239	D6RA25 D6RAS0 D6RD88 D6RIA4 Q53HV7	NM_001243789.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514685.1	SMUG1-004	926	177aa	ENSP00000421139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58239	D6RA25 D6RAS0 D6RD88 D6RIA4 Q53HV7	NM_001243790.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504338.1	SMUG1-017	751	172aa	ENSP00000423083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA25 D6RA78 D6RAS0 D6RD88 D6RIA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506595.1	SMUG1-021	712	177aa	ENSP00000421206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58239	D6RA25 D6RAS0 D6RD88 D6RIA4 Q53HV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000243112.5	SMUG1-008	627	177aa	ENSP00000243112.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58239	D6RA25 D6RAS0 D6RD88 D6RIA4 Q53HV7	NM_001243791.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506169.1	SMUG1-011	572	90aa	ENSP00000427547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD88 D6RIA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514196.1	SMUG1-013	553	159aa	ENSP00000425974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA25 D6RAS0 D6RD88 D6RI04 D6RIA4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503306.1	SMUG1-018	541	82aa	ENSP00000425426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD88	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504797.1	SMUG1-016	470	95aa	ENSP00000421790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAS0 D6RD88 D6RIA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507904.1	SMUG1-010	465	108aa	ENSP00000423457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA25 D6RAS0 D6RD88 D6RIA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509864.1	SMUG1-022	621	143aa	ENSP00000426440.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000505662.1	SMUG1-006	1422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505597.1	SMUG1-014	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503231.1	SMUG1-015	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509078.1	SMUG1-019	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503447.1	SMUG1-009	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511522.1	SMUG1-012	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511854.1	SMUG1-023	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 627 bps, Translation length: 177 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q53HV7

CCDS

This transcript is a member of the Human CCDS set: CCDS58239

Version

ENST00000243112.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000359081 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000243112.5 SMUG1-008

Summary