Transcript: ENST00000243052.3 PDE1B-001

Description

phosphodiesterase 1B, calmodulin-dependent [Source:HGNC Symbol;Acc:8775]

Gene Synonyms

PDE1B1, PDES1B

Location

Chromosome 12: 54,943,134-54,973,023 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 19 domains and features, is associated with 12794 variant alleles and maps to 639 oligo probes.

Gene

This transcript is a product of gene ENSG00000123360.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243052.3	PDE1B-001	3444	536aa	ENSP00000243052.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8882	B3KX78 B4DK72 Q01064 Q7Z364	NM_001288769.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550620.1	PDE1B-005	2150	516aa	ENSP00000448519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53800	B3KX78 B4DK72 Q01064 Q7Z364	NM_001165975.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538346.1	PDE1B-004	1711	495aa	ENSP00000442559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KX78 B4DK72 Q7Z364	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550285.1	PDE1B-003	2209	191aa	ENSP00000447354.1	Nonsense mediated decay		F8VZK3	-	-
ENST00000394277.3	PDE1B-006	2992	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542335.1	PDE1B-007	2782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548855.1	PDE1B-002	4734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552774.1	PDE1B-008	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 3,444 bps, Translation length: 536 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01064

CCDS

This transcript is a member of the Human CCDS set: CCDS8882

Version

ENST00000243052.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406203 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000243052.3 PDE1B-001

Summary