Transcript: ENST00000545638.2 NCKAP1L-002

Description

NCK-associated protein 1-like [Source:HGNC Symbol;Acc:4862]

Gene Synonyms

HEM1

Location

Chromosome 12: 54,892,568-54,936,747 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 4 domains and features, is associated with 19032 variant alleles and maps to 735 oligo probes.

Gene

This transcript is a product of gene ENSG00000123338.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293373.6	NCKAP1L-001	4720	1127aa	ENSP00000293373.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31813	B2RA26 P55160 Q5XG97 Q9BV52	NM_005337.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545638.2	NCKAP1L-002	3612	1077aa	ENSP00000445596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53799	B2RA26 P55160 Q5XG97 Q9BV52	NM_001184976.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548221.1	NCKAP1L-003	3559	449aa	ENSP00000447246.1	Nonsense mediated decay		F8W050	-	-
ENST00000552211.1	NCKAP1L-007	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548916.1	NCKAP1L-008	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547500.1	NCKAP1L-005	636	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549451.1	NCKAP1L-004	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548980.1	NCKAP1L-006	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 3,612 bps, Translation length: 1,077 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55160

CCDS

This transcript is a member of the Human CCDS set: CCDS53799

Version

ENST00000545638.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406198 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000545638.2 NCKAP1L-002

Summary