Transcript: ENST00000342216.4 PKN1-002

Description

protein kinase N1 [Source:HGNC Symbol;Acc:9405]

Gene Synonyms

DBK, MGC46204, PAK-1, PAK1, PKN, PKN-ALPHA, PRK1, PRKCL1

Location

Chromosome 19: 14,551,072-14,582,678 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 40 domains and features, is associated with 16188 variant alleles and maps to 582 oligo probes.

Gene

This transcript is a product of gene ENSG00000123143.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242783.6	PKN1-001	3069	942aa	ENSP00000242783.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42513	Q16512	NM_002741.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342216.4	PKN1-002	2960	948aa	ENSP00000343325.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42514	Q16512	NM_213560.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586557.1	PKN1-005	899	255aa	ENSP00000465842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKY9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590097.1	PKN1-006	848	263aa	ENSP00000466367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592960.1	PKN1-013	677	226aa	ENSP00000468497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000585619.1	PKN1-004	582	14aa	ENSP00000467422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586237.1	PKN1-010	529	151aa	ENSP00000466819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EN76	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591461.1	PKN1-011	867	198aa	ENSP00000465867.1	Nonsense mediated decay		K7EL10	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587429.1	PKN1-014	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592794.1	PKN1-015	322	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585839.1	PKN1-003	3518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586039.1	PKN1-012	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586900.1	PKN1-008	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588200.1	PKN1-007	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587215.1	PKN1-009	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 2,960 bps, Translation length: 948 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16512

CCDS

This transcript is a member of the Human CCDS set: CCDS42514

Version

ENST00000342216.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000095511 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000342216.4 PKN1-002

Summary