Transcript: ENST00000242285.6 CLTA-001

Description

clathrin, light chain A [Source:HGNC Symbol;Acc:2090]

Gene Synonyms

LCA, Lca

Location

Chromosome 9: 36,190,934-36,212,056 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 9380 variant alleles and maps to 545 oligo probes.

Gene

This transcript is a product of gene ENSG00000122705.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000433436.2	CLTA-201	1235	248aa	ENSP00000401019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P09496	NM_007096.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538225.1	CLTA-202	1181	230aa	ENSP00000442869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P09496	NM_001184760.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000242285.6	CLTA-001	1152	248aa	ENSP00000242285.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6601	P09496	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470744.1	CLTA-003	1102	230aa	ENSP00000419746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55306	P09496	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396603.2	CLTA-004	1090	236aa	ENSP00000379848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43802	P09496	NM_001076677.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345519.5	CLTA-002	1073	218aa	ENSP00000242284.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6600	P09496	NM_001833.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540080.1	CLTA-203	989	166aa	ENSP00000437508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55307	P09496	NM_001184762.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466396.1	CLTA-005	695	196aa	ENSP00000417698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8P9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464497.1	CLTA-008	1890	260aa	ENSP00000419158.1	Nonsense mediated decay		F8WF69	-	-
ENST00000493185.2	CLTA-007	714	64aa	ENSP00000474266.1	Nonsense mediated decay		S4R3F6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,152 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09496

CCDS

This transcript is a member of the Human CCDS set: CCDS6601

Version

ENST00000242285.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052405 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000242285.6 CLTA-001

Summary