Transcript: ENST00000382321.4 PMS2-006

Description

PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:9122]

Gene Synonyms

HNPCC4, H_DJ0042M02.9, PMS2CL, PMSL2

Location

Chromosome 7: 6,013,030-6,048,650 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 24869 variant alleles and maps to 1196 oligo probes.

Gene

This transcript is a product of gene ENSG00000122512.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265849.7	PMS2-001	2855	862aa	ENSP00000265849.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5343	P54278	NM_000535.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441476.2	PMS2-201	2271	756aa	ENSP00000392843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J167	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406569.3	PMS2-005	1719	572aa	ENSP00000384308.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54278	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382321.4	PMS2-006	1386	461aa	ENSP00000371758.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54278	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469652.1	PMS2-004	93	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000380416.5	PMS2-007	1103	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000415839.2	PMS2-002	924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,386 bps, Translation length: 461 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54278

Version

ENST00000382321.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000325471 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000382321.4 PMS2-006

Summary