Transcript: ENST00000381140.4 GTF3A-001

Description

general transcription factor IIIA [Source:HGNC Symbol;Acc:4662]

Gene Synonyms

AP2, TFIIIA

Location

About this transcript

This transcript has 9 exons, is annotated with 51 domains and features, is associated with 5096 variant alleles and maps to 505 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381140.4	GTF3A-001	1383	365aa	ENSP00000370532.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45019	Q92664	NM_002097.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439403.1	GTF3A-010	628	178aa	ENSP00000393050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBK4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419181.1	GTF3A-002	1191	188aa	ENSP00000389655.1	Nonsense mediated decay		H7BZH7	-	-
ENST00000438571.1	GTF3A-005	792	104aa	ENSP00000387806.1	Nonsense mediated decay		H7BZ51	-	-
ENST00000435781.1	GTF3A-004	688	134aa	ENSP00000409175.1	Nonsense mediated decay		H7C326	-	-
ENST00000470606.1	GTF3A-003	1919	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493903.1	GTF3A-008	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466776.1	GTF3A-006	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482655.1	GTF3A-009	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,383 bps, Translation length: 365 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92664

CCDS

This transcript is a member of the Human CCDS set: CCDS45019

Version

ENST00000381140.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044281 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.