Transcript: ENST00000539393.1 IAPP-005

Description

islet amyloid polypeptide [Source:HGNC Symbol;Acc:5329]

Gene Synonyms

AMYLIN, DAP, IAP

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 10294 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542023.1	IAPP-002	2015	79aa	ENSP00000445711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000240652.3	IAPP-001	1958	89aa	ENSP00000240652.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8688	F5H0S1 P10997	NM_000415.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535428.1	IAPP-004	460	85aa	ENSP00000437559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539393.1	IAPP-005	409	89aa	ENSP00000437357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8688	F5H0S1 P10997	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537593.1	IAPP-003	351	79aa	ENSP00000445980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0S1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 409 bps, Translation length: 89 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10997

CCDS

This transcript is a member of the Human CCDS set: CCDS8688

Version

ENST00000539393.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402355 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.