Transcript: ENST00000436909.3 PAPD5-001

Description

PAP associated domain containing 5 [Source:HGNC Symbol;Acc:30758]

Gene Synonyms

TRF4-2

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 34214 variant alleles and maps to 581 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357464.3	PAPD5-201	7842	619aa	ENSP00000350054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRJ7 B7ZLC1 E9PC61 Q5EBM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436909.3	PAPD5-001	4635	698aa	ENSP00000396995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54006	B4DRJ7 B7ZLC1 G4U4J3 Q5EBM7 Q8NDF8	NM_001040285.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561678.1	PAPD5-002	2916	588aa	ENSP00000455837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRJ7 H3BQM0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573002.1	PAPD5-004	3754	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562717.1	PAPD5-003	1866	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,635 bps, Translation length: 698 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NDF8

CCDS

This transcript is a member of the Human CCDS set: CCDS54006

Version

ENST00000436909.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000423149 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.