Transcript: ENST00000506156.1 FAM117A-009

Description

family with sequence similarity 117, member A [Source:HGNC Symbol;Acc:24179]

Location

Chromosome 17: 47,795,019-47,841,493 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 17948 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000121104.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240364.2	FAM117A-001	2365	453aa	ENSP00000240364.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11553	B7Z7Q3 Q9C073	NM_030802.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513602.1	FAM117A-002	1522	181aa	ENSP00000465808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7Q3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511743.1	FAM117A-012	789	230aa	ENSP00000427326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506156.1	FAM117A-009	714	223aa	ENSP00000421412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503573.1	FAM117A-013	776	55aa	ENSP00000467070.1	Nonsense mediated decay		K7ENS5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514018.1	FAM117A-005	1128	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505159.1	FAM117A-003	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515240.1	FAM117A-010	624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503855.1	FAM117A-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509347.1	FAM117A-004	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503720.1	FAM117A-007	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514841.1	FAM117A-011	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 714 bps, Translation length: 223 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000506156.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365744 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000506156.1 FAM117A-009

Summary