Transcript: ENST00000350148.5 SMAD9-001

Description

SMAD family member 9 [Source:HGNC Symbol;Acc:6774]

Gene Synonyms

MADH6, MADH9, PPH2, SMAD8, SMAD8A, SMAD8B

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 34486 variant alleles and maps to 506 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379826.4	SMAD9-201	5592	467aa	ENSP00000369154.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45032	O15198	NM_001127217.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350148.5	SMAD9-001	5447	430aa	ENSP00000239885.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9360	O15198	NM_005905.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399275.2	SMAD9-002	5389	467aa	ENSP00000382216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45032	O15198	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483941.1	SMAD9-003	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,447 bps, Translation length: 430 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15198

CCDS

This transcript is a member of the Human CCDS set: CCDS9360

Version

ENST00000350148.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044526 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.