Transcript: ENST00000543637.1 NUP43-008

Description

nucleoporin 43kDa [Source:HGNC Symbol;Acc:21182]

Gene Synonyms

FLJ13287, bA350J20.1, p42

Location

Chromosome 6: 150,059,902-150,067,671 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 3972 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSG00000120253.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340413.2	NUP43-004	3874	380aa	ENSP00000342262.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5218	A0PJK4 Q8NFH3	NM_198887.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367403.3	NUP43-201	3836	248aa	ENSP00000356373.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DVD1 Q5VYB5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460354.2	NUP43-202	2186	380aa	ENSP00000432401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5218	A0PJK4 Q8NFH3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367404.4	NUP43-007	1089	284aa	ENSP00000356374.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543637.1	NUP43-008	576	178aa	ENSP00000438031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0E3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000403890.3	NUP43-005	1012	117aa	ENSP00000385078.3	Nonsense mediated decay		B4E301	-	-
ENST00000367402.2	NUP43-002	882	187aa	ENSP00000356372.2	Nonsense mediated decay		B4DVD1	-	-
ENST00000463048.3	NUP43-003	523	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 576 bps, Translation length: 178 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000543637.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396951 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000543637.1 NUP43-008

Summary