Transcript: ENST00000347197.5 CRHR1-005

Description

corticotropin releasing hormone receptor 1 [Source:HGNC Symbol;Acc:2357]

Gene Synonyms

CRF-R, CRF-R-1, CRF-R1, CRF1, CRFR, CRFR-1, CRFR1, CRH-R-1, CRH-R1, CRH-R1h, CRHR, CRHR1L, CRHR1f

Location

Chromosome 17: 43,861,673-43,913,191 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 19 domains and features, is associated with 21634 variant alleles and maps to 916 oligo probes.

Gene

This transcript is a product of gene ENSG00000120088.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314537.5	CRHR1-002	2535	415aa	ENSP00000326060.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42350	P34998	NM_004382.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398285.3	CRHR1-001	2399	444aa	ENSP00000381333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45712	P34998	NM_001145146.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000293493.7	CRHR1-201	1618	240aa	ENSP00000293493.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58556	P34998	NM_001256299.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339069.5	CRHR1-202	1577	285aa	ENSP00000340522.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DMR5 Q8WXR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577353.1	CRHR1-004	1206	401aa	ENSP00000462016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45713	P34998	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352855.5	CRHR1-003	1146	375aa	ENSP00000344068.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45714	P34998	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580876.1	CRHR1-009	223	75aa	ENSP00000463177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WXR6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000347197.5	CRHR1-005	2462	145aa	ENSP00000239167.7	Nonsense mediated decay		J9JIC6	-	-
ENST00000535778.2	CRHR1-008	1272	52aa	ENSP00000439934.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583888.1	CRHR1-010	777	152aa	ENSP00000462553.1	Nonsense mediated decay		J3KSM0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580955.1	CRHR1-006	479	93aa	ENSP00000463852.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582766.1	CRHR1-007	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581479.1	CRHR1-011	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 6, Transcript length: 2,462 bps, Translation length: 145 residues

Version

ENST00000347197.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441246 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000347197.5 CRHR1-005

Summary