Transcript: ENST00000238856.4 AFTPH-003

Description

aftiphilin [Source:HGNC Symbol;Acc:25951]

Gene Synonyms

AFTH, FLJ20080, FLJ23793, MGC33965, Nbla10388

Location

Chromosome 2: 64,751,465-64,820,139 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 30291 variant alleles and maps to 561 oligo probes.

Gene

This transcript is a product of gene ENSG00000119844.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422803.1	AFTPH-202	4090	937aa	ENSP00000397726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI9 Q6ULP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238855.7	AFTPH-201	4087	936aa	ENSP00000238855.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46303	Q6ULP2	NM_203437.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238856.4	AFTPH-003	4014	909aa	ENSP00000238856.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1878	Q6ULP2	NM_017657.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409933.1	AFTPH-001	2811	936aa	ENSP00000387071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46303	Q6ULP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409183.1	AFTPH-002	1874	568aa	ENSP00000386913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487769.1	AFTPH-005	781	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498706.1	AFTPH-004	4674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,014 bps, Translation length: 909 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ULP2

CCDS

This transcript is a member of the Human CCDS set: CCDS1878

Version

ENST00000238856.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327302 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000238856.4 AFTPH-003

Summary