Transcript: ENST00000419026.1 SENP5-003

Description

SUMO1/sentrin specific peptidase 5 [Source:HGNC Symbol;Acc:28407]

Gene Synonyms

MGC27076

Location

Chromosome 3: 196,594,816-196,657,883 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 29204 variant alleles and maps to 315 oligo probes.

Gene

This transcript is a product of gene ENSG00000119231.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323460.5	SENP5-001	6308	755aa	ENSP00000327197.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3322	C9JHT8 Q96HI0	NM_152699.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445299.2	SENP5-002	2491	709aa	ENSP00000390231.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419026.1	SENP5-003	973	245aa	ENSP00000396927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434433.1	SENP5-006	622	77aa	ENSP00000415227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448068.1	SENP5-005	484	98aa	ENSP00000405663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489744.1	SENP5-004	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463245.1	SENP5-007	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 973 bps, Translation length: 245 residues

Version

ENST00000419026.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340526 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000419026.1 SENP5-003

Summary