Transcript: ENST00000536219.1 TMEM5-006

Description

transmembrane protein 5 [Source:HGNC Symbol;Acc:13530]

Gene Synonyms

HP10481, MDDGA10

Location

About this transcript

This transcript has 3 exons, is associated with 2453 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537373.1	TMEM5-003	1966	183aa	ENSP00000440280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61179	G3V1K2	NM_001278237.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261234.6	TMEM5-001	1918	443aa	ENSP00000261234.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8966	G3V1K2 Q9Y2B1	NM_014254.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543342.1	TMEM5-002	1599	120aa	ENSP00000440845.1	Nonsense mediated decay		F5GXF8	-	-
ENST00000537982.1	TMEM5-007	882	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535963.1	TMEM5-008	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000433461.2	TMEM5-004	2002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536219.1	TMEM5-006	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 864 bps,

Version

ENST00000536219.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400822 (version 1)