Transcript: ENST00000527673.1 RPS25-001

Description

ribosomal protein S25 [Source:HGNC Symbol;Acc:10413]

Gene Synonyms

S25

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 1989 variant alleles and maps to 371 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527673.1	RPS25-001	835	125aa	ENSP00000435096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8406	P62851	NM_001028.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527791.1	RPS25-003	711	39aa	ENSP00000436193.1	Nonsense mediated decay		E9PQK3	-	-
ENST00000532567.1	RPS25-005	508	39aa	ENSP00000431634.1	Nonsense mediated decay		E9PK60	-	-
ENST00000528547.1	RPS25-007	189	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527853.1	RPS25-008	1462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524864.1	RPS25-002	1078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 835 bps, Translation length: 125 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62851

CCDS

This transcript is a member of the Human CCDS set: CCDS8406

Version

ENST00000527673.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389324 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.