Transcript: ENST00000464698.1 IRF6-003

Description

interferon regulatory factor 6 [Source:HGNC Symbol;Acc:6121]

Gene Synonyms

LPS, OFC6, PIT, PPS, PPS1, VWS, VWS1

Location

About this transcript

This transcript has 2 exons, is associated with 858 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367021.3	IRF6-001	4306	467aa	ENSP00000355988.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1492	B1AJU4 G0Z349 O14896	NM_006147.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542854.1	IRF6-201	1472	372aa	ENSP00000440532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55681	O14896	NM_001206696.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456314.1	IRF6-002	1027	276aa	ENSP00000403855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AJU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464698.1	IRF6-003	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 596 bps,

Version

ENST00000464698.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000088829 (version 1)