Transcript: ENST00000543398.1 PRPF3-202

Description

pre-mRNA processing factor 3 [Source:HGNC Symbol;Acc:17348]

Gene Synonyms

HPRP3, HPRP3P, PRP3, Prp3, Prp3p, RP18, SNRNP90, hPrp3

Location

Chromosome 1: 150,294,002-150,318,563 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 5 domains and features, is associated with 11237 variant alleles and maps to 407 oligo probes.

Gene

This transcript is a product of gene ENSG00000117360.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324862.6	PRPF3-001	2433	683aa	ENSP00000315379.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS951	O43395	NM_004698.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414970.2	PRPF3-201	2146	634aa	ENSP00000387844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543398.1	PRPF3-202	1889	281aa	ENSP00000445421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467329.1	PRPF3-007	2595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467514.1	PRPF3-003	1097	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496202.1	PRPF3-002	1082	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476970.1	PRPF3-004	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470824.1	PRPF3-005	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493553.1	PRPF3-006	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 6, Transcript length: 1,889 bps, Translation length: 281 residues

Version

ENST00000543398.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000543398.1 PRPF3-202

Summary