Transcript: ENST00000235932.4 RAB7L1-002

Description

RAB7, member RAS oncogene family-like 1 [Source:HGNC Symbol;Acc:9789]

Gene Synonyms

RAB7L

Location

Chromosome 1: 205,738,565-205,744,577 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 2687 variant alleles and maps to 431 oligo probes.

Gene

This transcript is a product of gene ENSG00000117280.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367139.3	RAB7L1-001	3272	203aa	ENSP00000356107.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1459	E9PL56 O14966 Q6FGU7	NM_003929.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000235932.4	RAB7L1-002	1723	203aa	ENSP00000235932.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1459	E9PL56 O14966 Q6FGU7	NM_001135662.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446390.2	RAB7L1-008	1441	179aa	ENSP00000389899.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44301	O14966	NM_001135663.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437324.2	RAB7L1-007	1306	131aa	ENSP00000416613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44302	O14966	NM_001135664.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414729.1	RAB7L1-003	1157	203aa	ENSP00000402910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1459	E9PL56 O14966 Q6FGU7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528078.1	RAB7L1-006	1571	42aa	ENSP00000431483.1	Nonsense mediated decay		E9PL56	-	-
ENST00000468887.1	RAB7L1-005	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533111.1	RAB7L1-009	209	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492534.1	RAB7L1-004	906	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,723 bps, Translation length: 203 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14966

CCDS

This transcript is a member of the Human CCDS set: CCDS1459

Version

ENST00000235932.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000087733 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000235932.4 RAB7L1-002

Summary