Transcript: ENST00000409627.2 SUMO1-006

Description

small ubiquitin-like modifier 1 [Source:HGNC Symbol;Acc:12502]

Gene Synonyms

DAP1, GMP1, OFC10, PIC1, SENP2, SMT3, SMT3C, SMT3H3, SUMO-1, UBL1

Location

Chromosome 2: 203,071,865-203,103,289 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 14178 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSG00000116030.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392246.2	SUMO1-001	1536	101aa	ENSP00000376077.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2352	B8ZZ67 P63165	NM_003352.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409368.1	SUMO1-002	1187	146aa	ENSP00000387204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392245.1	SUMO1-201	1071	101aa	ENSP00000376076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2352	B8ZZ67 P63165	NM_001005781.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392244.3	SUMO1-007	831	76aa	ENSP00000376075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46493	B8ZZ67 P63165	NM_001005782.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409181.1	SUMO1-005	784	58aa	ENSP00000386753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZJ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409498.2	SUMO1-003	779	62aa	ENSP00000386472.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409712.1	SUMO1-004	761	77aa	ENSP00000386296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9A032	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409205.1	SUMO1-010	534	62aa	ENSP00000386267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409627.2	SUMO1-006	722	73aa	ENSP00000386500.2	Nonsense mediated decay		F8WBI1	-	-
ENST00000469034.1	SUMO1-008	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 722 bps, Translation length: 73 residues

Version

ENST00000409627.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327875 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000409627.2 SUMO1-006

Summary