Transcript: ENST00000443218.1 ODC1-003

Description

ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:8109]

Gene Synonyms

ODC

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 1500 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234111.4	ODC1-001	2653	461aa	ENSP00000234111.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1672	C9JG30 P11926	NM_002539.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405333.1	ODC1-002	1943	461aa	ENSP00000385333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1672	C9JG30 P11926	NM_001287189.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443218.1	ODC1-003	494	68aa	ENSP00000390691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG30	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446285.1	ODC1-004	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 494 bps, Translation length: 68 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000443218.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323540 (version 1)