Transcript: ENST00000410040.1 IL18R1-003

Description

interleukin 18 receptor 1 [Source:HGNC Symbol;Acc:5988]

Gene Synonyms

CD218a, CDw218a, IL-1Rrp, IL18RA, IL1RRP

Location

About this transcript

This transcript has 11 exons, is annotated with 32 domains and features, is associated with 40785 variant alleles and maps to 380 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409599.1	IL18R1-001	3854	541aa	ENSP00000387211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2060	B7ZKV7 Q13478	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233957.1	IL18R1-201	3522	541aa	ENSP00000233957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2060	B7ZKV7 Q13478	NM_003855.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410040.1	IL18R1-003	1749	541aa	ENSP00000386663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2060	B7ZKV7 Q13478	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000334376.3	IL18R1-202	513	170aa	ENSP00000334030.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86YL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466357.1	IL18R1-004	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,749 bps, Translation length: 541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13478

CCDS

This transcript is a member of the Human CCDS set: CCDS2060

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000410040.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329511 (version 1)