Transcript: ENST00000452281.1 STAT1-006

Description

signal transducer and activator of transcription 1, 91kDa [Source:HGNC Symbol;Acc:11362]

Gene Synonyms

CANDF7, ISGF-3, STAT91

Location

Chromosome 2: 191,840,353-191,878,954 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 10 domains and features, is associated with 16618 variant alleles and maps to 1222 oligo probes.

Gene

This transcript is a product of gene ENSG00000115415.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361099.3	STAT1-001	4310	750aa	ENSP00000354394.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2309	E7ENM1 E7EPD2 E9PH66 P42224 Q67C41	NM_007315.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409465.1	STAT1-011	3097	750aa	ENSP00000386244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2309	E7ENM1 E7EPD2 E9PH66 P42224 Q67C41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392323.2	STAT1-002	2723	714aa	ENSP00000376137.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENM1 E7EPD2 E9PH66 J3KPM9 Q67C41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392322.3	STAT1-003	2716	712aa	ENSP00000376136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42793	E7ENM1 E7EPD2 E9PH66 P42224 Q67C41	NM_139266.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540176.1	STAT1-201	2261	193aa	ENSP00000438703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D2KFR9 E7ENM1 E7EPD2 E9PH66 Q67C41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424722.1	STAT1-004	736	180aa	ENSP00000402548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENM1 E7EPD2 E9PH66 Q67C41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454414.1	STAT1-008	572	150aa	ENSP00000411398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENM1 E9PH66 Q67C41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432058.1	STAT1-007	567	69aa	ENSP00000416019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PH66 Q67C41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452281.1	STAT1-006	2594	193aa	ENSP00000394512.1	Nonsense mediated decay		D2KFR9 E7ENM1 E7EPD2 E9PH66 Q67C41	-	-
ENST00000415035.1	STAT1-010	663	40aa	ENSP00000388240.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000423282.1	STAT1-005	477	58aa	ENSP00000388772.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464072.1	STAT1-009	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 6, Transcript length: 2,594 bps, Translation length: 193 residues

Version

ENST00000452281.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335580 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000452281.1 STAT1-006

Summary