Transcript: ENST00000489152.1 TTC31-002

Description

tetratricopeptide repeat domain 31 [Source:HGNC Symbol;Acc:25759]

Gene Synonyms

FLJ12788

Location

Chromosome 2: 74,710,200-74,721,686 forward strand.

About this transcript

This transcript has 7 exons, is associated with 5415 variant alleles and maps to 825 oligo probes.

Gene

This transcript is a product of gene ENSG00000115282.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000410003.1	TTC31-005	3358	340aa	ENSP00000387213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9H3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233623.5	TTC31-001	3235	519aa	ENSP00000233623.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42701	G5E9H3 Q49AM3	NM_022492.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442235.2	TTC31-201	1018	200aa	ENSP00000416823.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414247.1	TTC31-012	833	246aa	ENSP00000387843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000424122.1	TTC31-003	2806	116aa	ENSP00000388495.1	Nonsense mediated decay		D6W5I8	-	-
ENST00000449459.1	TTC31-004	2161	116aa	ENSP00000389127.1	Nonsense mediated decay		D6W5I8	-	-
ENST00000463189.1	TTC31-009	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489152.1	TTC31-002	4025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491252.1	TTC31-007	3860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464241.1	TTC31-006	1562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459957.1	TTC31-008	873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487623.1	TTC31-011	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463704.1	TTC31-010	431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 4,025 bps,

Version

ENST00000489152.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328423 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000489152.1 TTC31-002

Summary