Transcript: ENST00000263904.4 STAM2-001

Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:HGNC Symbol;Acc:11358]

Gene Synonyms

HBP, Hbp, STAM2A, STAM2B

Location

About this transcript

This transcript has 14 exons, is annotated with 23 domains and features, is associated with 26465 variant alleles and maps to 824 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263904.4	STAM2-001	5701	525aa	ENSP00000263904.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2196	O75886	NM_005843.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465460.1	STAM2-006	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482997.1	STAM2-004	1488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463854.1	STAM2-002	1364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489389.1	STAM2-003	1292	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494589.1	STAM2-005	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 5,701 bps, Translation length: 525 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75886

CCDS

This transcript is a member of the Human CCDS set: CCDS2196

Version

ENST00000263904.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254835 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.