Transcript: ENST00000295225.5 KCNIP3-001

Description

Kv channel interacting protein 3, calsenilin [Source:HGNC Symbol;Acc:15523]

Gene Synonyms

CSEN, DREAM, KCHIP3, calsenilin

Location

Chromosome 2: 95,963,052-96,051,825 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 23 domains and features, is associated with 39343 variant alleles and maps to 494 oligo probes.

Gene

This transcript is a product of gene ENSG00000115041.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295225.5	KCNIP3-001	2934	256aa	ENSP00000295225.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2013	Q9Y2W7	NM_013434.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360990.3	KCNIP3-201	2732	234aa	ENSP00000354261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468529.1	KCNIP3-004	985	230aa	ENSP00000417499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33245	Q9Y2W7	NM_001034914.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377181.2	KCNIP3-003	2971	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461336.1	KCNIP3-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486055.1	KCNIP3-005	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475491.1	KCNIP3-002	3658	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,934 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2W7

CCDS

This transcript is a member of the Human CCDS set: CCDS2013

Version

ENST00000295225.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252770 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000295225.5 KCNIP3-001

Summary