Transcript: ENST00000472518.1 RTKN-003

Description

rhotekin [Source:HGNC Symbol;Acc:10466]

Gene Synonyms

B5, RTKN1

Location

Chromosome 2: 74,658,882-74,669,025 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 4345 variant alleles and maps to 299 oligo probes.

Gene

This transcript is a product of gene ENSG00000114993.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305557.5	RTKN-001	2646	550aa	ENSP00000305298.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1941	Q9BST9	NM_033046.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233330.6	RTKN-004	2220	513aa	ENSP00000233330.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42699	Q9BST9	NM_001015056.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272430.5	RTKN-002	2142	563aa	ENSP00000272430.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33226	Q9BST9	NM_001015055.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484453.1	RTKN-007	820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479256.1	RTKN-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464094.2	RTKN-005	1266	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472518.1	RTKN-003	1105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492013.1	RTKN-009	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460968.1	RTKN-011	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469859.1	RTKN-008	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,105 bps,

Version

ENST00000472518.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328235 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000472518.1 RTKN-003

Summary