Transcript: ENST00000487622.1 UMPS-013

Description

uridine monophosphate synthetase [Source:HGNC Symbol;Acc:12563]

Gene Synonyms

OPRT, RP11-71H17.9

Location

Chromosome 3: 124,456,978-124,461,512 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1836 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSG00000114491.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000232607.2	UMPS-001	2658	480aa	ENSP00000232607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3029	A8K5J1 B5LY64 P11172	NM_000373.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536109.1	UMPS-202	2235	388aa	ENSP00000443577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5LY64 P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538242.1	UMPS-203	1982	302aa	ENSP00000444988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5LY64 P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413078.2	UMPS-201	1691	205aa	ENSP00000397965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479719.1	UMPS-009	2340	342aa	ENSP00000420754.1	Nonsense mediated decay		E9PFD2	-	-
ENST00000467167.1	UMPS-008	2242	66aa	ENSP00000419618.1	Nonsense mediated decay		F2Z303	-	-
ENST00000460034.1	UMPS-006	2081	66aa	ENSP00000420409.1	Nonsense mediated decay		F2Z303	-	-
ENST00000462091.1	UMPS-002	2001	57aa	ENSP00000417893.1	Nonsense mediated decay		F2Z3P2	-	-
ENST00000474588.1	UMPS-004	1789	142aa	ENSP00000420348.1	Nonsense mediated decay		F8WDG4	-	-
ENST00000497791.1	UMPS-005	1691	57aa	ENSP00000419121.1	Nonsense mediated decay		F2Z3P2	-	-
ENST00000498715.1	UMPS-011	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495751.1	UMPS-012	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487622.1	UMPS-013	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 799 bps,

Version

ENST00000487622.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355283 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000487622.1 UMPS-013

Summary