Transcript: ENST00000415188.1 USP4-011

Description

ubiquitin specific peptidase 4 (proto-oncogene) [Source:HGNC Symbol;Acc:12627]

Gene Synonyms

UNP, UNPH, Unph

Location

Chromosome 3: 49,354,165-49,377,469 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 9872 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSG00000114316.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000351842.4	USP4-001	3222	916aa	ENSP00000341028.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2794	Q13107	NM_199443.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265560.4	USP4-002	3126	963aa	ENSP00000265560.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2793	Q13107	NM_003363.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431357.1	USP4-004	2141	621aa	ENSP00000399079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416417.1	USP4-005	1536	313aa	ENSP00000400623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58832	Q13107	NM_001251877.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415188.1	USP4-011	1454	363aa	ENSP00000408274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNU9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488520.1	USP4-008	1155	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491791.1	USP4-014	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486549.1	USP4-010	749	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462673.1	USP4-012	709	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464168.1	USP4-013	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461553.1	USP4-009	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475873.2	USP4-007	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485450.1	USP4-003	3541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483212.1	USP4-006	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,454 bps, Translation length: 363 residues

Version

ENST00000415188.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346078 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000415188.1 USP4-011

Summary