Transcript: ENST00000502897.1 SUB1-007

Description

SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985]

Gene Synonyms

P15, PC4, RPO2TC1, p14, p15

Location

Chromosome 5: 32,585,694-32,601,256 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 7738 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000113387.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265073.4	SUB1-001	3507	127aa	ENSP00000265073.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3897	P53999 Q59G24 Q6IBA2	NM_006713.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506237.1	SUB1-011	908	127aa	ENSP00000422078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3897	P53999 Q59G24 Q6IBA2	-	-
ENST00000515355.1	SUB1-006	771	127aa	ENSP00000426850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3897	P53999 Q59G24 Q6IBA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512913.1	SUB1-012	684	127aa	ENSP00000422806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3897	P53999 Q59G24 Q6IBA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510442.1	SUB1-009	580	65aa	ENSP00000423893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502897.1	SUB1-007	562	127aa	ENSP00000427100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3897	P53999 Q59G24 Q6IBA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511615.1	SUB1-004	1658	84aa	ENSP00000423356.1	Nonsense mediated decay		D6R970	-	-
ENST00000504789.1	SUB1-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504016.1	SUB1-015	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513013.1	SUB1-013	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502453.1	SUB1-005	4273	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511175.1	SUB1-014	636	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511988.1	SUB1-010	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 562 bps, Translation length: 127 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53999

CCDS

This transcript is a member of the Human CCDS set: CCDS3897

Version

ENST00000502897.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366570 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000502897.1 SUB1-007

Summary