Transcript: ENST00000316068.3 MCM9-001

Description

minichromosome maintenance complex component 9 [Source:HGNC Symbol;Acc:21484]

Gene Synonyms

C6orf61, FLJ20170, MCMDC1, MGC35304, dJ329L24.1, dJ329L24.3

Location

Chromosome 6: 119,231,762-119,256,279 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 10224 variant alleles and maps to 306 oligo probes.

Gene

This transcript is a product of gene ENSG00000111877.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316316.6	MCM9-002	5101	1143aa	ENSP00000314505.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56447	D6RE85 D6RHY8 Q9NXL9	NM_017696.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316068.3	MCM9-001	2442	391aa	ENSP00000312870.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5121	D6RE85 D6RHY8 Q9NXL9	NM_153255.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425154.2	MCM9-004	752	156aa	ENSP00000394776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE85 D6RHY8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458674.2	MCM9-008	549	183aa	ENSP00000406576.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000505446.1	MCM9-005	470	78aa	ENSP00000426890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505485.1	MCM9-006	825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000368478.2	MCM9-007	469	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000436788.2	MCM9-003	7592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,442 bps, Translation length: 391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NXL9

CCDS

This transcript is a member of the Human CCDS set: CCDS5121

Version

ENST00000316068.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000042004 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000316068.3 MCM9-001

Summary