Transcript: ENST00000543473.1 SUDS3-001

Description

suppressor of defective silencing 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29545]

Gene Synonyms

FLJ00052, SAP45, SDS3

Location

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 18524 variant alleles and maps to 568 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000543473.1	SUDS3-001	4897	328aa	ENSP00000443988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44993	Q2M2F3 Q52LB7 Q9H7L9	NM_022491.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397564.2	SUDS3-201	4731	329aa	ENSP00000380695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPW1 Q2M2F3 Q52LB7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541280.1	SUDS3-003	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541591.1	SUDS3-002	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000360286.2	SUDS3-004	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,897 bps, Translation length: 328 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H7L9

CCDS

This transcript is a member of the Human CCDS set: CCDS44993

Version

ENST00000543473.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401504 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.