Transcript: ENST00000381545.3 SLCO1B3-001

Description

solute carrier organic anion transporter family, member 1B3 [Source:HGNC Symbol;Acc:10961]

Gene Synonyms

HBLRR, LST-2, LST-3TM13, LST2, LST3, OATP-8, OATP1B3, OATP8, SLC21A8

Location

Chromosome 12: 20,963,660-21,069,658 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 31 domains and features, is associated with 52062 variant alleles and maps to 545 oligo probes.

Gene

This transcript is a product of gene ENSG00000111700.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381545.3	SLCO1B3-001	2805	702aa	ENSP00000370956.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8684	F5H8K0 Q9NPD5	NM_019844.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261196.2	SLCO1B3-201	2712	702aa	ENSP00000261196.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8684	F5H8K0 Q9NPD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553473.1	SLCO1B3-202	2247	748aa	ENSP00000451758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8K0 Q5JAR4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544370.1	SLCO1B3-005	1771	479aa	ENSP00000443225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGG9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540853.1	SLCO1B3-003	1002	291aa	ENSP00000442000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8K0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545880.1	SLCO1B3-004	339	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 2,805 bps, Translation length: 702 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPD5

CCDS

This transcript is a member of the Human CCDS set: CCDS8684

Version

ENST00000381545.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401936 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381545.3 SLCO1B3-001

Summary