Transcript: ENST00000549175.1 ACSS3-007

Description

acyl-CoA synthetase short-chain family member 3 [Source:HGNC Symbol;Acc:24723]

Gene Synonyms

FLJ21963

Location

Chromosome 12: 81,331,594-81,528,742 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 87672 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene ENSG00000111058.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000548058.1	ACSS3-001	4803	686aa	ENSP00000449535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9022	F8VZB4 Q9H6R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261206.3	ACSS3-002	2666	685aa	ENSP00000261206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZB4	NM_024560.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548324.1	ACSS3-003	2214	368aa	ENSP00000448965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H6R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549175.1	ACSS3-007	534	93aa	ENSP00000447748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZB4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546664.1	ACSS3-006	379	75aa	ENSP00000449507.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551745.1	ACSS3-005	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548387.1	ACSS3-004	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 534 bps, Translation length: 93 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000549175.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407793 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000549175.1 ACSS3-007

Summary