Transcript: ENST00000227520.5 CCDC86-001

Description

coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:28359]

Gene Synonyms

CYCLON, MGC2574

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 3992 variant alleles and maps to 397 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000227520.5	CCDC86-001	1893	360aa	ENSP00000227520.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7993	B4DY99 Q9H6F5	NM_024098.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545580.1	CCDC86-005	697	104aa	ENSP00000440906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535217.1	CCDC86-003	1488	88aa	ENSP00000442111.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,893 bps, Translation length: 360 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H6F5

CCDS

This transcript is a member of the Human CCDS set: CCDS7993

Version

ENST00000227520.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395743 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.