Transcript: ENST00000264867.2 PPARGC1A-001

Description

peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:HGNC Symbol;Acc:9237]

Gene Synonyms

LEM6, PGC-1(alpha), PGC-1v, PGC1, PGC1A, PPARGC1

Location

Chromosome 4: 23,793,644-23,891,700 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 43588 variant alleles and maps to 612 oligo probes.

Gene

This transcript is a product of gene ENSG00000109819.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264867.2	PPARGC1A-001	6318	798aa	ENSP00000264867.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3429	G8DM16 Q9UBK2	NM_013261.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507380.1	PPARGC1A-004	2385	99aa	ENSP00000424181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBF3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506055.1	PPARGC1A-007	2627	271aa	ENSP00000423075.1	Nonsense mediated decay		Q9UBK2	-	-
ENST00000513205.1	PPARGC1A-008	1432	301aa	ENSP00000421632.1	Nonsense mediated decay		B7Z406	-	-
ENST00000509702.1	PPARGC1A-006	2704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509642.1	PPARGC1A-005	1391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508380.1	PPARGC1A-011	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512169.1	PPARGC1A-012	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514517.1	PPARGC1A-010	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515534.1	PPARGC1A-015	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503714.1	PPARGC1A-014	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507342.1	PPARGC1A-003	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514494.1	PPARGC1A-002	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505469.1	PPARGC1A-009	406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514479.1	PPARGC1A-013	324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 6,318 bps, Translation length: 798 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBK2

CCDS

This transcript is a member of the Human CCDS set: CCDS3429

Version

ENST00000264867.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000214976 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000264867.2 PPARGC1A-001

Summary