Transcript: ENST00000514989.1 BST1-003

Description

bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:1118]

Gene Synonyms

CD157

Location

Chromosome 4: 15,716,951-15,739,936 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 9982 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000109743.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382346.3	BST1-002	1993	333aa	ENSP00000371783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NC48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265016.4	BST1-001	1480	318aa	ENSP00000265016.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3416	Q10588	NM_004334.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514445.1	BST1-005	1002	155aa	ENSP00000420925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y8G4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514989.1	BST1-003	801	97aa	ENSP00000424761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000505785.1	BST1-004	770	186aa	ENSP00000423357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 801 bps, Translation length: 97 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000514989.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs4320134, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-YRI.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000359348 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000514989.1 BST1-003

Summary