Transcript: ENST00000585807.1 HSD17B1-001

Description

hydroxysteroid (17-beta) dehydrogenase 1 [Source:HGNC Symbol;Acc:5210]

Gene Synonyms

E17KSR, EDH17B1, EDH17B2, EDHB17, HSD17, MGC138140, SDR28C1

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 3191 variant alleles and maps to 736 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000585807.1	HSD17B1-001	4982	328aa	ENSP00000466799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11428	P14061	NM_000413.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000225929.5	HSD17B1-002	1265	329aa	ENSP00000225929.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590299.1	HSD17B1-005	1059	149aa	ENSP00000465128.1	Nonsense mediated decay		B4DU11	-	-
ENST00000593215.1	HSD17B1-003	1077	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587280.1	HSD17B1-004	1036	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,982 bps, Translation length: 328 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14061

CCDS

This transcript is a member of the Human CCDS set: CCDS11428

Version

ENST00000585807.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000450392 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.