Transcript: ENST00000406116.3 RPS6KB1-002

Description

ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10436]

Gene Synonyms

PS6K, S6K, S6K-beta-1, S6K1, STK14A, p70 S6KA, p70(S6K)-alpha, p70-S6K, p70-alpha

Location

Chromosome 17: 57,970,506-58,025,549 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 24183 variant alleles and maps to 733 oligo probes.

Gene

This transcript is a product of gene ENSG00000108443.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225577.4	RPS6KB1-001	5375	525aa	ENSP00000225577.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11621	B4DLT4 K7EIM2 P23443	NM_003161.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393021.3	RPS6KB1-201	2046	472aa	ENSP00000376744.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62273	B4DLT4 K7EIM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406116.3	RPS6KB1-002	1982	451aa	ENSP00000384335.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62271	K7EIM2 Q7Z721	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443572.2	RPS6KB1-008	1913	502aa	ENSP00000441993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62272	F6UYM1	NM_001272042.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592726.1	RPS6KB1-007	622	62aa	ENSP00000464805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472940.1	RPS6KB1-003	2808	140aa	ENSP00000468058.1	Nonsense mediated decay		K7EIM2 K7ER06	-	-
ENST00000489824.1	RPS6KB1-004	909	52aa	ENSP00000466562.1	Nonsense mediated decay		K7EMM2	-	-
ENST00000587061.1	RPS6KB1-011	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477179.1	RPS6KB1-005	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590928.1	RPS6KB1-010	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475155.1	RPS6KB1-006	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587622.1	RPS6KB1-009	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,982 bps, Translation length: 451 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS62271

Version

ENST00000406116.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319325 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000406116.3 RPS6KB1-002

Summary