Transcript: ENST00000579921.1 MTMR4-005

Description

myotubularin related protein 4 [Source:HGNC Symbol;Acc:7452]

Gene Synonyms

FYVE-DSP2, KIAA0647, ZFYVE11

Location

Chromosome 17: 56,588,809-56,595,200 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 2586 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000108389.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323456.5	MTMR4-001	5839	1195aa	ENSP00000325285.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11608	J3QRJ2 Q9NYA4	NM_004687.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579925.1	MTMR4-003	5614	1138aa	ENSP00000464067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR65 J3QRJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583656.1	MTMR4-004	810	197aa	ENSP00000463479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT95 J3QLB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579921.1	MTMR4-005	425	95aa	ENSP00000463259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583243.1	MTMR4-006	317	16aa	ENSP00000464588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000582390.1	MTMR4-002	1281	112aa	ENSP00000462869.1	Nonsense mediated decay		J3KT95	-	-
ENST00000582663.1	MTMR4-007	572	98aa	ENSP00000464247.1	Nonsense mediated decay		J3QRJ2	-	-
ENST00000580983.1	MTMR4-008	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578259.1	MTMR4-010	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583966.1	MTMR4-009	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 425 bps, Translation length: 95 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000579921.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444728 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000579921.1 MTMR4-005

Summary